Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889315.1_cds_XP_016444010.1_39114
CDS Infomation

[gene=LOC107769317] [db_xref=GeneID:107769317] [protein=protein SSUH2 homolog isoform X3] [protein_id=XP_016444010.1] [location=complement(join(13554..13938,14369..14494,14727..14868,15019..15350,15716..15785,17384..17596,18163..18184))] [gbkey=CDS]
Sequence

ATGGAGGAGCCACTGTTGACAGCAAGCGAAACAGGTCAAAGAGGGAGTGAGAGATGGAGC
TCTTATGAGAATGTGGGAAGGGCGGGCTCTGTGATTCCTACGACTTCTTTGGCCGGATCA
GAAGTCAGCGTCGATGAGATTCGGTCTGCTGCTTCTATGTCAGTTCCTTACTCTCCTTCT
CTCCATGCCCCCTTGGTCAGCTCTCCCCAATCCCAATCTCAGCCACAATTTTATGCAGAG
CAAGGGATTGTTTATCAGGGTGGGTACTATGGAGCTGCAGGTGAAACTGCCAGTGATGCA
AGGAGGCAAGTGCTGGACGAGGTAGAAGTACGAGAGTTGCTTATAGATCATGTTGGCCAT
CGCTGCTGTTGGGGAAGTCGACCAGCTCGGACCTGGAAGATTCATGCAATTGAAGACTGC
AATGTCTATGTGGGGACGCTAGAAACTTTCGCAGAAGAGAGAGATACAATTATAGAGAAG
GAGCCATACTCCAGTGGCAGCATTGACGGAAAAGATAAAGGGCCTGAAATGGGAATATGG
GAATTGGATTTAAGGTCTGAATTTCCTGTTTTGTTTGTACCTTACAAGGAGTCACGACTG
AGAATTCCTCATTCGGAAACTATAGAGAAATGTTCAGCTTGTGATGGTCGAGGAAATGTA
GTTTGTCCTACTTGCAATGCAGATCAAGAGCCAGGGTTTTACAAGGAGGGTCAAATGGCC
CAGTGTCCTACTTGCTACGGAAGGGGTCTAATTGCTCACAAGGACGGATCTGACTCAATA
TGCCTGAAGTGTAAAGGTAACGGGAAACTTCCTTGTGTGACATGTGAATCTCGTGGCCTG
ATCAAATGCCAAACATGCCAAGGTGGTGGTTCTCTTTTGTCACGGAAAGTAGCTGTTGTT
AGATGGAGGACACTTTCAACCCGGAAAGTAAACGCTACAAGTGGAGCAGGTTCTGTTCCA
GATGACGTGTTTCACCGAGCAAAGGGAGTTCAGTTGTGCAATAACCAAGCTTACCAGTGC
ACTCCAGCCTACTTTGCTGATTCATATTTTCTTAACAAGTTCTCTTCTGAAGTAATTGCA
GAGAGGCCTTCAATACCTACTACTGCAAGGATCATATGCGAGCGCCACACCATCTCTGTT
GTCCCGGTGACTCGCGTGACCATGACTGATCGTAATCGCTCCTTCAGTTTCTATATTATT
GGAAATGGAAGAGAGGTTTATATGAAAGACTACTATCCTTCTAGGTTTTGTTGGGGCCTT
TGTCCTTGCTTGGAATGGTTGAAACTATAA

Peptide Sequence

PEP ID

XP_016444010.1
PEP Infomation

PREDICTED: protein SSUH2 homolog isoform X3 [Nicotiana tabacum]
Sequence

MEEPLLTASETGQRGSERWSSYENVGRAGSVIPTTSLAGSEVSVDEIRSAASMSVPYSPS
LHAPLVSSPQSQSQPQFYAEQGIVYQGGYYGAAGETASDARRQVLDEVEVRELLIDHVGH
RCCWGSRPARTWKIHAIEDCNVYVGTLETFAEERDTIIEKEPYSSGSIDGKDKGPEMGIW
ELDLRSEFPVLFVPYKESRLRIPHSETIEKCSACDGRGNVVCPTCNADQEPGFYKEGQMA
QCPTCYGRGLIAHKDGSDSICLKCKGNGKLPCVTCESRGLIKCQTCQGGGSLLSRKVAVV
RWRTLSTRKVNATSGAGSVPDDVFHRAKGVQLCNNQAYQCTPAYFADSYFLNKFSSEVIA
ERPSIPTTARIICERHTISVVPVTRVTMTDRNRSFSFYIIGNGREVYMKDYYPSRFCWGL
CPCLEWLKL

Transcript Sequence

Gene sequence data has not been registered.